NIAID target selection

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 Display all fields for selected targets  
 

Species

 Genome name    Taxon number    Genome NCBI accession  
 

ID

 NCBI gi code    PID    Gene symbol    Molecule    RAST / SEED ID  
 Primary annotation locus    Secondary annotation locus  
 

Function

 Primary annotation common name    Secondary annotation common name    Subsystem  
 TIGR main role category    TIGR sub-role category    EC    GO    RXN ID  
 Viral Bioinformatics Resource Center (VBRC) Gene Name  
 

Features

 Sequence    Length (aa)    PI    DNA    Gene beginning    Gene end    Strand  
 GC content    TMS    SP    Phobius prediction    LP  
 TMHMM (number of helices)    TMHMM (topology)    Constructs  
 Protease / peptidase    Protease motifs  
 Glycosyl group metabolism    DNA binding motifs    Cell wall    Core genome  
 Microarray evidence up / down regulation    Proteomics evidence - periplasmic / cytosolic  
 Virulence associated genes (VAGs / VAGs 1)    VAGs 2    Vaccine target  
 Notes    Justification    Comments  
 

Homologues

 Gram- gene homologue    Gram+ gene homologue    Drug target homologues  
 Essential gene homologue (Ji et al)    Essential gene homologue (Forsyth et al)  
 TargetDB 100-90% seq id    TargetDB 90-80% seq id    TargetDB 80-70% seq id    TargetDB 70-30% seq id    PDB 100-90% seq id    PDB 90-80% seq id    PDB 80-70% seq id    PDB 70-30% seq id  
 

Drug targets

 Lance Stewart's drug targets February 2008  
 

Selection

(Restrict report to selected targets)

 Phase 1 selection October 2007  
 Phase 2 selection November 2007  
 Phase 4 selection April 2009  
 Community requests June 2008  
 Community requests 2010  
 All targets from all phases  
   
  		 Phase 2 selection March 2008  
 Phase 3 selection June 2008  
 Phase 5 selection 2010  
 Community requests 2009  
 All entries (all database entries including
      other proteins of interest in addition to targets)

 
 
 
 
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This page was last updated on the 21st of May 2009